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Add validation + compatibility tests for DeepLabCut-live #56
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41db059
dlc_processor: add lightweight validation of shape and dtype (+tests)
deruyter92 4c97d58
Add basic compatibility tests for deeplabcut-live API
deruyter92 1ad9a61
Add optional smoke test for exported dlclive model via env vars
deruyter92 7e4b753
Update dlclivegui/services/dlc_processor.py
deruyter92 d9c0fdf
Update dlclivegui/services/dlc_processor.py
deruyter92 693c931
Update dlclivegui/services/dlc_processor.py
deruyter92 622722b
Remove duplicate commands block from rebase
C-Achard 60a0e8a
Use Python 3.12 in CI testing matrix
C-Achard 990654b
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,122 @@ | ||
| from __future__ import annotations | ||
|
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| import importlib.metadata | ||
| import inspect | ||
| import os | ||
| from pathlib import Path | ||
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| import numpy as np | ||
| import pytest | ||
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| def _get_signature_params(callable_obj) -> tuple[set[str], bool]: | ||
| """ | ||
| Return allowed keyword names for callable, allowing for **kwargs. | ||
|
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| Example: | ||
| >>> params, accepts_var_kw = _get_signature_params(lambda x, y, **kwargs: None, {"x", "y"}) | ||
| >>> params == {"x", "y"} | ||
| True | ||
| >>> accepts_var_kw | ||
| True | ||
| """ | ||
| sig = inspect.signature(callable_obj) | ||
| params = sig.parameters | ||
| accepts_var_kw = any(p.kind == inspect.Parameter.VAR_KEYWORD for p in params.values()) | ||
| return params, accepts_var_kw | ||
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| @pytest.mark.dlclive_compat | ||
| def test_dlclive_package_is_importable(): | ||
| from dlclive import DLCLive # noqa: PLC0415 | ||
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| assert DLCLive is not None | ||
| # Helpful for CI logs to confirm matrix install result. | ||
| _ = importlib.metadata.version("deeplabcut-live") | ||
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| @pytest.mark.dlclive_compat | ||
| def test_dlclive_constructor_accepts_gui_expected_kwargs(): | ||
| """ | ||
| GUI passes these kwargs when constructing DLCLive. | ||
| This test catches upstream API changes that would break initialization. | ||
| """ | ||
| from dlclive import DLCLive # noqa: PLC0415 | ||
|
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| expected = { | ||
| "model_path", | ||
| "model_type", | ||
| "processor", | ||
| "dynamic", | ||
| "resize", | ||
| "precision", | ||
| "single_animal", | ||
| "device", | ||
| } | ||
| params, accepts_var_kw = _get_signature_params(DLCLive.__init__) | ||
| missing = {name for name in expected if name not in params} | ||
| assert not missing, f"DLCLive.__init__ is missing expected kwargs called by GUI: {sorted(missing)}" | ||
| assert accepts_var_kw, "DLCLive.__init__ should accept **kwargs" # captures current behavior | ||
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| @pytest.mark.dlclive_compat | ||
| def test_dlclive_methods_match_gui_usage(): | ||
| """ | ||
| GUI expects: | ||
| - init_inference(frame) | ||
| - get_pose(frame, frame_time=<float>) | ||
| """ | ||
| from dlclive import DLCLive # noqa: PLC0415 | ||
|
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| assert hasattr(DLCLive, "init_inference"), "DLCLive must provide init_inference(frame)" | ||
| assert hasattr(DLCLive, "get_pose"), "DLCLive must provide get_pose(frame, frame_time=...)" | ||
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| init_params, _ = _get_signature_params(DLCLive.init_inference) | ||
| init_missing = {name for name in {"frame"} if name not in init_params} | ||
| assert not init_missing, f"DLCLive.init_inference signature mismatch, missing: {sorted(init_missing)}" | ||
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| get_pose_params, _ = _get_signature_params(DLCLive.get_pose) | ||
| get_pose_missing = {name for name in {"frame", "frame_time"} if name not in get_pose_params} | ||
| assert not get_pose_missing, f"DLCLive.get_pose signature mismatch, missing: {sorted(get_pose_missing)}" | ||
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| @pytest.mark.dlclive_compat | ||
| def test_dlclive_minimal_inference_smoke(): | ||
| """ | ||
| Real runtime smoke test (init + pose call) using a tiny exported model. | ||
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| Opt-in via env vars: | ||
| - DLCLIVE_TEST_MODEL_PATH: absolute/relative path to exported model folder/file | ||
| - DLCLIVE_TEST_MODEL_TYPE: optional model type (default: pytorch) | ||
| """ | ||
| model_path_env = os.getenv("DLCLIVE_TEST_MODEL_PATH", "").strip() | ||
| if not model_path_env: | ||
| pytest.skip("Set DLCLIVE_TEST_MODEL_PATH to run real DLCLive inference smoke test.") | ||
|
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| model_path = Path(model_path_env).expanduser() | ||
| if not model_path.exists(): | ||
| pytest.skip(f"DLCLIVE_TEST_MODEL_PATH does not exist: {model_path}") | ||
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| model_type = os.getenv("DLCLIVE_TEST_MODEL_TYPE", "pytorch").strip() or "pytorch" | ||
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| from dlclive import DLCLive # noqa: PLC0415 | ||
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| from dlclivegui.services.dlc_processor import validate_pose_array # noqa: PLC0415 | ||
|
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| dlc = DLCLive( | ||
| model_path=str(model_path), | ||
| model_type=model_type, | ||
| dynamic=[False, 0.5, 10], | ||
| resize=1.0, | ||
| precision="FP32", | ||
| single_animal=True, | ||
| ) | ||
|
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| frame = np.zeros((64, 64, 3), dtype=np.uint8) | ||
| dlc.init_inference(frame) | ||
| pose = dlc.get_pose(frame, frame_time=0.0) | ||
| pose_arr = validate_pose_array(pose, source_backend="DLCLive.get_pose") | ||
|
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||
| assert pose_arr.ndim in (2, 3) | ||
| assert pose_arr.shape[-1] == 3 | ||
| assert np.isfinite(pose_arr).all() |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,40 @@ | ||
| import numpy as np | ||
| import pytest | ||
|
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| from dlclivegui.services.dlc_processor import validate_pose_array | ||
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| @pytest.mark.unit | ||
| def test_validate_pose_array_keeps_single_animal_shape(): | ||
| pose = np.ones((5, 3), dtype=np.float64) | ||
| out = validate_pose_array(pose) | ||
| assert out.shape == (5, 3) | ||
| assert out.dtype == np.float64 | ||
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| @pytest.mark.unit | ||
| def test_validate_pose_array_accepts_multi_animal(): | ||
| pose = np.ones((2, 5, 3), dtype=np.float32) | ||
| out = validate_pose_array(pose) | ||
| assert out.shape == (2, 5, 3) | ||
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| @pytest.mark.unit | ||
| @pytest.mark.parametrize( | ||
| "bad_pose,expected", | ||
| [ | ||
| (np.ones((5, 2), dtype=np.float32), "last dimension size 3"), | ||
| (np.ones((2, 5, 4), dtype=np.float32), "last dimension size 3"), | ||
| (np.ones((3,), dtype=np.float32), "expected a 2D or 3D array"), | ||
| ], | ||
| ) | ||
| def test_validate_pose_array_rejects_invalid_shapes(bad_pose, expected): | ||
| with pytest.raises(ValueError, match=expected): | ||
| validate_pose_array(bad_pose) | ||
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| @pytest.mark.unit | ||
| def test_validate_pose_array_rejects_non_numeric(): | ||
| pose = np.array([[["x", "y", "p"]]], dtype=object) | ||
| with pytest.raises(ValueError, match="expected numeric values"): | ||
| validate_pose_array(pose) | ||
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Thanks a lot for the extra tests !