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Popular repositories Loading

  1. Bulk_RNA_seq Bulk_RNA_seq Public

    Generic pipeline for Bulk RNA seq analysis from a fastq folder

    Shell

  2. jsdearbo.github.io jsdearbo.github.io Public

    Personal Web Page

    SCSS

  3. SRA_to_BigWigs SRA_to_BigWigs Public

    Download fastqs from NCBI SRA. Trim, align, and convert to bigwig files for inspection

    Shell

  4. sequence_to_function_model_tools sequence_to_function_model_tools Public

    Reusable tools for training, fine-tuning, and interpreting genomic sequence-to-function models

    Python

  5. genomic_model_interpretation genomic_model_interpretation Public

    Interpretation and visualization toolkit for genomic sequence-to-function models

    Python

  6. variant_effect_prediction variant_effect_prediction Public

    Toolkit for predicting and analyzing the functional effects of genetic variants using genomic sequence-to-function models

    Python